This is kind of like cutting off your leg because of a hangnail. I've been running a Skylake MBP for more than 6 months for compilation workloads and haven't seen a single processor hang.
I'm much more annoyed by the completely unpredictable desktop assignment on monitors when hotplugging DisplayPort connections on multiple displays. This one bothers me every day.
I haven't seen any erratic crashes yet on code compiled by LLVM 8.1.0 on multiple projects (ROS, Qt5). I hope a microcode fix is pushed by Apple on behalf of Intel soon.
If so, there's a way to disable hyper-threading, but you need Xcode (Instruments).
Open Instruments. Go to Preferences. Choose 'CPU'. Uncheck "Hardware Multi-Threading". Rebooting will reset it.