Yes but contrived sentences are bad examples. If you have to carefully parse a sentence's punctuation to come to the correct meaning, the sentence should be rewritten. (Analogous to forcing code maintainers to remember obscure precedence rules to understand your code.)
I'm not sure what you're point is, becauae on first read it looks like you're agreeing with me? The whole point of the quote was that contrived sentences aren't good examples.
The point I took from that quote was that many punctuation rules come about to address difficult to parse situations. My point is that, if it's a difficult to parse situation, you should probably rewrite it in some way so that punctuation isn't so critical to understanding.